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 Resources & Research
 Clone Name Manipulation Tutorial    

Scenario 1: The clone coordinates are in a text format and plate row and column are separated by a space. However the desired format is the one required by bacpac online ordering.

Scenario 2: The clone names are in a text file and need to be separated into their individual components: library name, plate number, row, column.

 

Scenario 1: The clone coordinates are in a text format and plate row and column are separated by a space.

FROM         TO       

1. Use Excel's data manipulation functions in order to combine the different parts of the clone name.

a - paste your clones from notepad into excel

b - Select the column containing the clone information

c - open text to columns window from the data menu.

d - Select the delimited mode.

e - select Space as the delimiter.

Note: using this window, you could also separate a library from a clone name, eg RP11-130G11
into RP11 and 130G11 (using "-" as the delimiter).

f - if a column needs to have a special format, select the column and specify the format.

Note: if one of the destination columns contained a clone coordinate, you would have to set
it as text since conflicts could arise for clone names with column E, for instance, Excel would
mis-read a clone named 150E3 and interpret it as the number 150000 (to prevent this you
would also need to specify the target "cell format" as text using the cells properties).

g - The text is now separated.

h - type in the formula using the "&" operator. & acts as the + operator with the difference that it operates on
strings and concatenates them together.

1 - The result is the full clone name. Click and hold on the tiny square pointed to by the arrow and drag down;
release the mouse button.

Note: You could also double click the square pointed to by the arrow.

j - The result is the list of clones as expected. It can now be pasted directly into the online clone ordering page.

 

Scenario 2: The clone names are in a text file and need to be separated into their individual components: library name, plate number, row, column.

FROM     TO     

a - if you start from a full clone name you can separate library name from the actual clone coordinate using Scenario 1 e) and f).

b - The clone coordinates are in Microsoft Word.

c - Select Edit - Replace.

d - Click on the "More" button.

e - More advanced search options appear.

f - for the "Find What" box, select "Any Letter".

g - Select the "Replace With" Field.

h - Select repetitively the replace fields in the order indicated in the picture (Tab Character
then Find What Text then Tab Character).

Note: the tab character is necessary here because it will allow easier pasting into Excel. When pasting
under excel, as tab character instructs excel to go to the following cell (the cell to the right) and
an "end of line" character instructs excel to go to the beginning of the next line.

i - Click the Replace All Button.

k - Here are the resulting split clone names. These can be pasted in excel and further operations can be
done on this list, in particular sorting of the clones.

k - to view the formatting in word click on the following icon

l - You can now see the formatting in Word and be sure that pasting under excel will work as expected.
the arrows indicate that there is a tab character.

Note: In Excel a tab characters instructs Excel to go to the following cell (to the right)

 

 

 

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